Finally this problem is solved, seems like I made a big mistake assuming the afudos version shipped with the utilities/driver cd was up to date. It wasn't. And the recovery bios image shipped on the same cd was completly f....d up. Probing it with Asus Update only resulted in blank letterboxes and something resembling how chineese letters look on a western computer. Trying to flash over it from there resulted in a dead end with a built in warning for trying to flash a incompatible bios image. Hmmm, thats funny. Allow me to flash using an incompatible image and the refuse me to revert the process due to incompatability issuses.
After using the "hot swap" method again to get the chip running, flashed it to 1.17 with afudos version 2.07 downloaded from a third party site, since I can't seem to find anything on asus's webpage (that is when it's not down due to massive requests or whatever they give as a reason). And it's working flawlessly again. There were some info about a boot section or something like that, may have been boot sector.. not sure, when I was flashing this time so there may be a part of the BIOS you couldn't reach before 2.07.
Anyhow must just complain about this afudos program some more, how can you make a piece of software that you constantly upgrade and not leave any info about which version you are using? Seems like they have started with that on 2.07 which clearly says version 2.07, but that's no help if your stuck with the shipped version or the from asus downloaded older versions of the program who doestn't say anything about version. Sadly this looks like something right up asus's alley, tell you to check asus webpage for updates when you are on asus webpage looking for updates. WTF?
Hope my experiences can help somebody. Check versions closely and don't trust that your product comes with up to date software.
/Tyrfing
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